@Vectorkov:
Also, I suggest thoroughly researching all the different transportation routes you will take… train types, train times, train routes,etc. That will help keep frustrations low.
Thank you, that's surely a good idea! Someone know if Google maps public transport indications are precise enough?
@Steven:
That's quite a bit of time to be in Kyoto, even with the Nara trip. I'd try to work in a visit to Osaka, and Miyajima if at all possible.
Hakone is pretty great. I used to live in Shizuoka, and it's my wife's hometown so I go back often. If you do overnight try and stay at a ryokan, and if it's just a day trip see if you can at least go to a nice onsen. Other than that I really like the Izu peninsula but it can be a pain without time and a car.
Tokyo, I imagine you have probably covered. Have fun!
Are you getting a rail pass? They let you get unlimited use of the JR rail-lines, including the bullet train, for various days/weeks depending on which one you get. They seem pricey at first but they end up saving you a lot of money if you plan on traveling a lot. Not totally necessary tho.
We will land in Osaka, so we count to visit it on the first day, sadly Miyajima is really out of our route…
Probably we'll follow your advice about cutting time in Kyoto, we are thinking about staying one more day in Hakone or in Tokyo, maybe making one day trip from Tokyo to some other place near.
And yes, we plan to stay in a ryokan at least in Hokuhida and Hakone, we like to be pampered a bit, isn't a honeymoon for that? :)
Besides that, we are a little scared because we will be there in the rainy season, I suppose that if we get tired of the rain, a onsen can be a nice B plan.
As for the Izu peninsula I'm a little afraid of driving in Japan, but there is still time, maybe I'll change my mind.
We will get the 14 days JR pass, looks like we will travel enough to make it convenient.
Thanks everyone!